CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os08g0369700

Gene name
Homology with Arabidopsis Similar to At5g03905: hesB-like domain-containing protein (HF=7e-5)

Module size 6 genes

NF 0.12

%ile 9.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.47 62.3 0.91 Os08g0369700 9636.m02793 - HesB/YadR/YfhF family protein 7e-5 At5g03905 hesB-like domain-containing protein O.I. H.G. S.X.
0.19 15.1 0.94 Os01g0886000 AK106349.1 - Protein of unknown function DUF179 family protein 7e-1 At3g24100 - O.I. H.G. S.X.
0.14 9.3 0.93 Os03g0687200 AK067324.1 - Hypothetical protein 2e-1 At1g67035 unknown protein O.I. H.G. S.X.
0.12 7.2 0.93 Os11g0565400 AK065292.1 - Zn-finger, RING domain containing protein 6e-3 At3g60300 RWD domain-containing protein O.I. H.G. S.X.
0.06 3.0 0.93 Os01g0859600 AK072151.1 - Cyclin-like F-box domain containing protein 2e-5 At1g67190 F-box family protein O.I. H.G. S.X.
0.05 2.5 0.93 Os03g0728100 AK068717.1 - Heat shock protein DnaJ, N-terminal domaincontaining protein 1e-5 At4g07990 DNAJ heat shock N-terminal domain-containing protein O.I. H.G. S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
44.5 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.2 99.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
12.7 98.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.4 98.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.3 98.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.3 98.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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