Co-expression analysis

Gene ID Os08g0359000
Gene name
Homology with ArabidopsisSimilar to At5g38660: APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) (HF=2e-4)
Module size 6 genes
NF 0.63
%ile 85.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.97Os08g0359000AK066474.1-Conserved hypothetical protein2e-4At5g38660APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)O.I.H.G.S.X.
0.7793.10.97Os06g0694800AK070249.1-Conserved hypothetical protein2e+0At5g43840AT-HSFA6AO.I.H.G.S.X.
0.6181.20.97Os01g0913000AF022741.1--2e-6At5g16400ATF2O.I.H.G.S.X.
0.6079.70.97Os03g0131200AY339372.1-Catalase isozyme 2 (EC 1.11.1.6)2e-45At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.6079.70.97Os06g0638200AK059450.1--3e-8At1g21065unknown proteinO.I.H.G.S.X.
0.4051.10.97Os03g0710600AK068746.1-Conserved hypothetical protein8e+0At4g20420tapetum-specific protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
65.799.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.198.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.198.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0221GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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