Co-expression analysis

Gene ID Os08g0357000
Gene name
Homology with ArabidopsisSimilar to At4g01340: CHP-rich zinc finger protein-related (HF=3e+1)
Module size 6 genes
NF 0.43
%ile 54.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.91Os08g0357000BQ905925-Conserved hypothetical protein3e+1At4g01340CHP-rich zinc finger protein-relatedO.I.H.G.S.X.
0.7391.10.92Os02g0219900AK060915.1-Protein of unknown function DUF588 family protein1e-1At4g36020CSDP1 (cold shock domain protein 1)O.I.H.G.S.X.
0.6079.70.94Os06g0270900AF162665.1-RF2 (EC 1.2.1.3) (T cytoplasm male sterilityrestorer factor 2)1e-53At1g23800ALDH2B7O.I.H.G.S.X.
0.5068.00.92Os01g0290000AK066523.1-Cyprosin precursor (EC 3.4.23.-) (Fragment)8e-14At1g11910aspartyl protease family proteinO.I.H.G.S.X.
0.3541.70.93Os09g0442300CB666183-Oryzain gamma chain precursor (EC 3.4.22.-)4e-30At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.1813.70.92Os03g0107800AK062666.1-Hypothetical protein4e-2At3g22290unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.098.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.997.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage