Co-expression analysis

Gene ID Os08g0344100
Gene name
Homology with ArabidopsisSimilar to At5g63110: HDA6 (HISTONE DEACETYLASE 6) (HF=2e-14)
Module size 6 genes
NF 0.48
%ile 63.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5978.00.97Os08g0344100AK111861.1-Histone deacetylase2e-14At5g63110HDA6 (HISTONE DEACETYLASE 6)O.I.H.G.S.X.
0.8395.80.96Os04g0117600AK111699.1-Dihydrouridine synthase, DuS family protein1e-19At4g38890dihydrouridine synthase family proteinO.I.H.G.S.X.
0.7793.10.97Os05g0181000AK122040.1-Heat shock protein Hsp70 family protein7e-12At1g79930HSP91O.I.H.G.S.X.
0.4458.10.97Os09g0372400AK064341.1-Hypothetical protein2e-1At1g20240-O.I.H.G.S.X.
0.3032.70.97Os02g0606100AU162342-Quinoprotein amine dehydrogenase, beta chain-likedomain containing protein6e-7At1g73180eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.2931.10.97Os05g0566900AK102711.1-TA9 protein (Fragment)4e-5At1g29370kinase-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.299.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.498.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.898.5GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0016575The modification of histones by removal of acetyl groups.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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