Co-expression analysis

Gene ID Os08g0279900
Gene name
Homology with ArabidopsisSimilar to At1g74140: - (HF=2e-1)
Module size 7 genes
NF 0.65
%ile 88.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.99Os08g02799009636.m01788--2e-1At1g74140-O.I.H.G.S.X.
0.8395.80.99Os09g0489800AK119382.1-Hypothetical protein6e-3At5g06950AHBP-1BO.I.H.G.S.X.
0.6787.20.99Os10g01565009638.m00602--5e-2At3g48800sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.5573.70.99Os04g01770009632.m00847-Protein kinase domain containing protein1e-4At5g38250serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.5068.00.99Os12g04967009640.m03033--2e-1At3g50550unknown proteinO.I.H.G.S.X.
0.5068.00.99Os10g01147009638.m00157--4e+0At5g48945LCR46 (Low-molecular-weight cysteine-rich 46)O.I.H.G.S.X.
0.4762.30.99Os01g0149700NM_184375.1-Protein kinase domain containing protein6e+0At4g23200protein kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.399.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
23.499.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.598.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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