Co-expression analysis

Gene ID Os08g0265500
Gene name
Homology with ArabidopsisSimilar to At4g28070: AFG1-like ATPase family protein (HF=5e-4)
Module size 6 genes
NF 0.22
%ile 20.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.89Os08g0265500AK100508.1-AFG1-like ATPase family protein5e-4At4g28070AFG1-like ATPase family proteinO.I.H.G.S.X.
0.3134.50.89Os03g0174800AK069179.1-Hypothetical protein2e+0At4g02830unknown proteinO.I.H.G.S.X.
0.2117.90.89Os05g0316100AK066887.1-Zinc transporter ZIP family protein1e-25At3g08650metal transporter family proteinO.I.H.G.S.X.
0.1712.60.88Os03g0180100AK108326.1-Conserved hypothetical protein2e-6At1g79770unknown proteinO.I.H.G.S.X.
0.1611.30.88Os02g0717500AK121801.1--2e-10At5g48020unknown proteinO.I.H.G.S.X.
0.1510.30.88Os06g06608009634.m04364-Protein kinase domain containing protein5e-6At1g53730SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.899.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
22.499.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.398.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.097.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0281GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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