Co-expression analysis

Gene ID Os08g0239300
Gene name
Homology with ArabidopsisSimilar to At4g17310: unknown protein (HF=6e-1)
Module size 8 genes
NF 0.64
%ile 86.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.76Os08g0239300AK059753.1-Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-)6e-1At4g17310unknown proteinO.I.H.G.S.X.
0.7189.60.86Os03g0187800AK105352.1-Protein of unknown function DUF250 domaincontaining protein3e+0At5g58490cinnamoyl-CoA reductase familyO.I.H.G.S.X.
0.6787.20.82Os06g0521500AK072761.1-Haem peroxidase, plant/fungal/bacterial familyprotein7e-4At3g50990electron carrier/ heme binding / peroxidaseO.I.H.G.S.X.
0.6382.70.82Os08g0190100AF141878.1-Oxalate oxidase-like protein or germin-likeprotein (Germin-like 8) (Germin-like 12)5e-1At1g02335GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.)O.I.H.G.S.X.
0.6382.70.86Os05g0135400AK063587.1-Plant peroxidase family protein4e-1At5g66390peroxidase 72 (PER72) (P72) (PRXR8)O.I.H.G.S.X.
0.5676.30.86Os10g0139700AK067458.1-Cytochrome P450 family protein2e-4At1g64940CYP89A6O.I.H.G.S.X.
0.5371.30.86Os11g0482200AK062443.1-Hypothetical protein3e-1At2g34585unknown proteinO.I.H.G.S.X.
0.5068.00.88Os04g0597800AK101480.1-Oligopeptide transporter, kidney isoform (Peptidetransporter 2) (Kidney H+/peptide cotransporter)2e-2At5g19640proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
46.499.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.798.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.697.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0331GO:0006857The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.Link to AmiGO
0.0211GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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