Co-expression analysis

Gene ID Os08g0207500
Gene name
Homology with ArabidopsisSimilar to At4g19680: IRT2 (HF=6e-2)
Module size 9 genes
NF 0.27
%ile 27.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.75Os08g0207500AK105258.1-Zinc transporter 1 precursor (ZRT/IRT-like protein1)6e-2At4g19680IRT2O.I.H.G.S.X.
0.4458.10.91Os10g0554900AK120846.1-Protein of unknown function DUF566 family protein9e-1At2g44770phagocytosis and cell motility protein ELMO1-relatedO.I.H.G.S.X.
0.4253.90.86Os07g02044009635.m01011-Conserved hypothetical protein2e-1At2g40530unknown proteinO.I.H.G.S.X.
0.3846.90.89Os05g0135500BX901098-Haem peroxidase, plant/fungal/bacterial familyprotein9e-1At1g29620unknown proteinO.I.H.G.S.X.
0.3338.80.87Os01g0649900AK068077.1-Lipolytic enzyme, G-D-S-L family protein5e-5At1g28600lipase, putativeO.I.H.G.S.X.
0.3338.80.89Os09g0422500AK121170.1-Cellulose synthase3e-33At5g17420IRX3 (IRREGULAR XYLEM 3)O.I.H.G.S.X.
0.127.20.80Os07g0689600AB023819.1-Nicotianamine synthase 9 (EC 2.5.1.43)(S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 9)8e-1At2g39250SNZ (SCHNARCHZAPFEN)O.I.H.G.S.X.
0.116.50.84Os02g0490500AK071953.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein6e-2At1g22360AtUGT85A2 (UDP-glucosyl transferase 85A2)O.I.H.G.S.X.
0.094.90.86Os12g0204500AK069867.1-Uncharacterized plant-specific domain 01627containing protein1e-2At1g71690unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.999.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
30.699.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.698.2GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1821GO:0010043A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.Link to AmiGO
0.1001GO:0006826The directed movement of iron (Fe) ions into, out of, within or between cells.Link to AmiGO
0.1001GO:0006829The directed movement of zinc (Zn) ions into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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