Co-expression analysis

Gene ID Os08g0203700
Gene name
Homology with ArabidopsisSimilar to At1g56120: kinase (HF=2e-3)
Module size 6 genes
NF 0.28
%ile 29.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.89Os08g0203700AK100532.1-Protein kinase domain containing protein2e-3At1g56120kinaseO.I.H.G.S.X.
0.5068.00.90Os10g0578200AK110534.1-Cellulose synthase-95e-41At5g16910CSLD2 (CELLULOSE-SYNTHASE LIKE D2)O.I.H.G.S.X.
0.3134.50.90Os02g0578300AK105275.1--2e-7At1g22400UGT85A1O.I.H.G.S.X.
0.3032.70.90Os05g0148900AK120912.1-Glutathione-S-transferase 19E501e+0At1g03860ATPHB2 (PROHIBITIN 2)O.I.H.G.S.X.
0.1510.30.90Os01g0536400NM_193243.1-Isopenicillin N synthase family protein2e+0At3g28950avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedO.I.H.G.S.X.
0.1510.30.89Os10g01226009638.m00247-Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein1e-18At4g36490SFH12 (SEC14-LIKE 12)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.699.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.898.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.998.0GSM431926Root- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
9.197.9GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlingsLink to GEO
7.497.5GSM431925Root- +Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
6.697.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0911GO:0017000The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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