Co-expression analysis

Gene ID Os08g0199900
Gene name
Homology with ArabidopsisSimilar to At5g66980: transcriptional factor B3 family protein (HF=4e+0)
Module size 6 genes
NF 0.31
%ile 32.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.99Os08g01999009636.m00956--4e+0At5g66980transcriptional factor B3 family proteinO.I.H.G.S.X.
0.6787.20.99Os05g0121700AK107571.1-RecA bacterial DNA recombination protein familyprotein3e+0At3g53620AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)O.I.H.G.S.X.
0.5573.70.99Os04g0621600CB630709-NB-ARC domain containing protein7e-2At5g02840LCL1 (LHY/CCA1-like 1)O.I.H.G.S.X.
0.3338.80.99Os06g04760009634.m02689--3e+0At3g17090protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.3032.70.99Os02g03074009630.m01958--1e+0At5g55710-O.I.H.G.S.X.
0.138.20.99Os02g0590700AK100917.1-Conserved hypothetical protein4e-2At3g20860ATNEK5 (NIMA-RELATED KINASE5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
74.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
22.999.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.597.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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