Co-expression analysis

Gene ID Os08g0157600
Gene name
Homology with ArabidopsisSimilar to At1g01060: LHY (LATE ELONGATED HYPOCOTYL) (HF=5e-31)
Module size 23 genes
NF 0.44
%ile 55.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.10.87Os08g0157600AY452478.1-Myb, DNA-binding domain containing protein5e-31At1g01060LHY (LATE ELONGATED HYPOCOTYL)O.I.H.G.S.X.
0.6787.20.88Os08g0178800CA766768-Hypothetical protein2e+0At1g54775-O.I.H.G.S.X.
0.6079.70.91Os05g0582400AK069254.1-Blast and wounding induced mitogen-activatedprotein kinase6e-43At1g53510ATMPK18O.I.H.G.S.X.
0.5978.00.91Os01g0775100CB630660-Plus-3 domain containing protein5e-1At4g32930unknown proteinO.I.H.G.S.X.
0.5877.00.93Os01g0725800AK063441.1-Protein kinase family protein3e-19At2g47110UBQ6O.I.H.G.S.X.
0.5777.00.90Os02g0693500AK103651.1-Conserved hypothetical protein6e-1At4g17790-O.I.H.G.S.X.
0.5777.00.91Os03g0230500AK100971.1-Inositol 1, 3, 4-trisphosphate 56-kinase familyprotein1e-12At4g08170inositol 1,3,4-trisphosphate 5/6-kinase family proteinO.I.H.G.S.X.
0.5168.70.93Os03g0426800AK099511.1-Ubiquitin domain containing protein4e-4At1g77870MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR)O.I.H.G.S.X.
0.5068.00.92Os01g0171800AK067987.1-Conserved hypothetical protein2e-1At5g62960unknown proteinO.I.H.G.S.X.
0.4762.30.95Os02g0771100AB040053.1-COP1 regulatory protein (Constitutivephotomorphogenesis protein 1)3e-29At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.H.G.S.X.
0.4660.90.92Os01g0847200CB674427-Mannose-1-phosphate guanyltransferase (EC2.7.7.13) (ATP-mannose-1- phosphate guanylyltransferase)(GDP-mannose pyrophosphorylase) (NDP- hexosepyrophosphorylase)4e-37At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)O.I.H.G.S.X.
0.4660.90.92Os06g0217600AK071349.1-Hypothetical protein1e-7At5g10470kinesin motor protein-relatedO.I.H.G.S.X.
0.4253.90.91Os02g0591900AK060750.1-Conserved hypothetical protein2e-5At2g32850protein kinase family proteinO.I.H.G.S.X.
0.4253.90.92Os02g0680700CR281424-Myb, DNA-binding domain containing protein8e+0Atmg00300-O.I.H.G.S.X.
0.4051.10.90Os03g0387900AK063604.1-Hypothetical protein1e+0At1g57620emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.4051.10.88Os03g0598100AK071010.1-Amino acid-binding ACT domain containing protein2e-5At1g69040ACR4 (ACT REPEAT 4)O.I.H.G.S.X.
0.3846.90.91Os03g0191100AK070661.1-Mitochondrial substrate carrier family protein3e-4At5g64970mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.3745.00.93Os01g0498200AK062264.1-Hypothetical protein2e-1At5g51580unknown proteinO.I.H.G.S.X.
0.3644.00.91Os09g0527900AK122172.1-Hd1-like protein1e-5At2g21320zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.3541.70.93Os04g0662700AK069126.1-GTP cyclohydrolase I (EC 3.5.4.16)3e-1At3g07270GTP cyclohydrolase IO.I.H.G.S.X.
0.3236.30.92Os03g0572900AK102204.1-Multi antimicrobial extrusion protein MatE familyprotein8e-20At3g21690MATE efflux family proteinO.I.H.G.S.X.
0.2219.40.91Os09g0516600AK103563.1-Glyoxalase II2e-7At1g06130GLX2-4 (glyoxalase 2-4)O.I.H.G.S.X.
0.2016.50.91Os03g0684400AK100086.1-Mg2+ transporter protein, CorA-like family protein1e-30At5g22830ATMGT10 (MAGNESIUM (MG) TRANSPORTER 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.697.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.997.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.897.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0491GO:0006855The directed movement of drugs across a membrane into, out of, within or between cells.Link to AmiGO
0.0131GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage