CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os08g0126100

Gene name
Homology with Arabidopsis Similar to At2g35090: unknown protein (HF=5e+0)

Module size 6 genes

NF 0.80

%ile 98.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.73 91.1 0.99 Os08g0126100 9636.m00235 - - 5e+0 At2g35090 unknown protein O.I. H.G. S.X.
0.80 94.6 0.99 Os04g0298700 9632.m02154 - Conserved hypothetical protein 2e+0 At5g64400 - O.I. H.G. S.X.
0.80 94.6 0.99 Os11g0285100 9639.m01677 - - 8e+0 At5g16140 peptidyl-tRNA hydrolase family protein O.I. H.G. S.X.
0.73 91.1 0.99 Os12g0258300 9640.m01518 - - 7e+0 At4g29240 leucine-rich repeat family protein / extensin family protein O.I. H.G. S.X.
0.73 91.1 0.99 Os02g0773000 9630.m05270 - - 4e+0 At3g29140 unknown protein O.I. H.G. S.X.
0.61 81.2 0.99 Os11g0188700 9639.m00801 - - 2e-1 At4g11870 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
44.4 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.9 99.7 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
21.8 99.2 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
17.5 98.9 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
16.2 98.8 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
10.5 98.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.8 98.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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