Co-expression analysis

Gene ID Os07g0696000
Gene name
Homology with ArabidopsisSimilar to At5g25970: unknown protein (HF=3e-1)
Module size 6 genes
NF 0.19
%ile 16.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.91Os07g0696000AK108592.1-Hypothetical protein3e-1At5g25970unknown proteinO.I.H.G.S.X.
0.5777.00.93Os11g0633500AK066215.1-NBS-LRR disease resistance protein homologue(Fragment)2e+0At2g16070PDV2 (PLASTID DIVISION2)O.I.H.G.S.X.
0.2422.40.94Os12g0405400AK066879.1-Conserved hypothetical protein2e-2At2g30560glycine-rich proteinO.I.H.G.S.X.
0.127.20.92Os05g0238400AK073471.1-Conserved hypothetical protein4e-2At2g30560glycine-rich proteinO.I.H.G.S.X.
0.105.70.93Os06g0186700AK073039.1-Biopterin transport-related protein BT1 familyprotein7e-2At1g79710integral membrane transporter family proteinO.I.H.G.S.X.
0.105.70.93Os04g0302300AK072639.1-Conserved hypothetical protein5e-1At4g04500protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.599.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
32.899.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.799.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.398.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.098.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the soybean gene, HgAffx.16518.1.S1_at, orthologous to the query gene, Os07g0696000

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6HgAffx.16518.1.S1_atAt5g25970--3e+0At4g17245zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4057.1Gma.10943.2.S1_atAt5g25970--9e-1At5g42890SCP2 (STEROL CARRIER PROTEIN 2)O.I.H.G.S.X.
0.024.5GmaAffx.14280.1.S1_atAt5g25970--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
0.024.5GmaAffx.53244.1.S1_atAt5g25970--4e+0At4g29930basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.001.4Gma.12845.1.A1_atAt5g25970--3e+0At1g71330ATNAP5O.I.H.G.S.X.
0.001.4Gma.6221.1.S1_atAt5g25970--2e-22At1g32130-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage