Co-expression analysis

Gene ID Os07g0694700
Gene name
Homology with ArabidopsisSimilar to At1g07890: APX1 (ascorbate peroxidase 1) (HF=4e-25)
Module size 16 genes
NF 0.52
%ile 69.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.96Os07g0694700AB050724.1-Ascorbate peroxidase (EC 1.11.1.11)4e-25At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.7793.10.96Os04g0498600AF067194.1-S- adenosylmethionine decarboxylase beta chain]2e-5At5g15948CPuORF10 (Conserved peptide upstream open reading frame 10)O.I.H.G.S.X.
0.6281.50.97Os06g0130900D10965.1-Histone H3.31e-3At4g40030histone H3.2O.I.H.G.S.X.
0.5877.00.97Os02g0121300L29470.1-Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)(PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-bindingprotein)9e-12At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.5777.00.96Os05g0574500AB015972.1-GTP-binding nuclear protein RAN1B (Fragment)1e-112At5g20020RAN2O.I.H.G.S.X.
0.5777.00.98Os11g0425600AK121882.1-Four F5 protein family protein5e+0At5g42040RPN12b (Regulatory Particle Non-ATPase 12b)O.I.H.G.S.X.
0.5676.30.98Os08g0366100AK120339.1-EDF-1 protein (HMBF1alpha) (Endothelialdifferentiation-related factor 1, isoform alpha)(Fragment)6e-11At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.5573.70.96Os07g0545400AK059228.1-Protein H2A4e-7At5g54640RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5)O.I.H.G.S.X.
0.5068.00.97Os07g0114300AK062043.1-Conserved hypothetical protein3e-1At2g23090unknown proteinO.I.H.G.S.X.
0.4863.70.97Os01g0813400AK065370.1-ADP-ribosylation factor2e-96At2g47170ARF1A1CO.I.H.G.S.X.
0.4762.30.97Os06g0681400U37687.1-Polyubiquitin1e-160At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.4355.40.97Os08g0126300AK105038.1-Glyceraldehyde-3-phosphate dehydrogenase(Fragment)6e-23At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)O.I.H.G.S.X.
0.3745.00.98Os06g0152100AK121519.1-Profilin 28e-15At2g19760PRF1 (PROFILIN 1)O.I.H.G.S.X.
0.3440.00.97Os06g0175900AK120341.1-Ubiquinol-cytochrome C reductase complexubiquinone-binding protein QP-C (EC 1.10.2.2)(Ubiquinol-cytochrome C reductase complex 8.2 kDaprotein)3e-7At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.3440.00.97Os03g0710800AK062077.1-14-3-3-like protein S946e-57At3g02520GRF7 (GENERAL REGULATORY FACTOR 7)O.I.H.G.S.X.
0.3032.70.96Os03g0685500AB110171.1-CHCH domain containing protein6e-22At5g64400-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.298.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.497.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.496.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.396.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.396.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.296.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1051GO:0030036A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.Link to AmiGO
0.0871GO:0007010A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.Link to AmiGO
0.0782GO:0051276A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage