Co-expression analysis

Gene ID Os07g0673700
Gene name
Homology with ArabidopsisSimilar to At3g43583: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.40
%ile 49.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.93Os07g0673700AK071934.1-Cyclin-like F-box domain containing protein4e+0At3g43583unknown proteinO.I.H.G.S.X.
0.4355.40.93Os08g0478100AK063259.1-Protein of unknown function UPF0029 family protein2e-4At4g38090unknown proteinO.I.H.G.S.X.
0.4051.10.94Os03g0684000AK105025.2-Zn-finger, GATA type domain containing protein1e-2At3g21175ZML1 (ZIM-LIKE 1)O.I.H.G.S.X.
0.4051.10.94Os12g0103000AK068622.1-Mitochondrial substrate carrier family protein3e-16At2g35800mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.3134.50.93Os04g0577500AK065648.1-TatD-related deoxyribonuclease family protein2e-4At5g17570tatD-related deoxyribonuclease family proteinO.I.H.G.S.X.
0.2117.90.95Os02g01234009630.m00227-Conserved hypothetical protein1e+0At1g73970unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
53.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
25.599.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0006366The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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