Co-expression analysis

Gene ID Os07g0666900
Gene name
Homology with ArabidopsisSimilar to At3g05030: NHX2 (SODIUM HYDROGEN EXCHANGER 2) (HF=7e-33)
Module size 27 genes
NF 0.31
%ile 33.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.10.83Os07g0666900AY324877.1-Na/H antiporter Nhx17e-33At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)O.I.H.G.S.X.
0.5168.70.91Os09g0456100AK072474.1-Remorin, C-terminal region domain containingprotein4e-1At4g24430lyaseO.I.H.G.S.X.
0.4964.40.89Os04g0525700AK105830.1-Peptidase S10, serine carboxypeptidase familyprotein2e-1At5g23210SCPL34O.I.H.G.S.X.
0.4762.30.92Os01g0631700AK065494.1-Ser Thr specific protein kinase-like protein9e-23At2g42960protein kinase family proteinO.I.H.G.S.X.
0.4558.80.92Os02g0756100AK060615.1-Conserved hypothetical protein2e+0At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.4558.80.89Os06g0217900AK103765.1-Cyclin, C-terminal domain containing protein8e-1At4g14520DNA-directed RNA polymerase II-relatedO.I.H.G.S.X.
0.4152.40.88Os02g02197009630.m01160-CD9/CD37/CD63 antigen family protein4e-1At5g60220TET4 (TETRASPANIN4)O.I.H.G.S.X.
0.3745.00.92Os02g0702600AK102962.1-Protein of unknown function DUF315 domaincontaining protein3e-1At4g30480tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.3541.70.89Os03g0320800AK103265.1-Protein kinase domain containing protein3e-2At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.3440.00.88Os05g0220600AK073669.1-Rhomboid-like protein family protein1e-8At5g25752RBL11 (RHOMBOID-LIKE PROTEIN 11)O.I.H.G.S.X.
0.3338.80.94Os04g0625000CR289623-Hypothetical protein1e-13At3g20350unknown proteinO.I.H.G.S.X.
0.3338.80.95Os01g0195200AK105501.1-Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)3e-10At2g20300ALE2 (Abnormal Leaf Shape 2)O.I.H.G.S.X.
0.2831.10.89Os04g0615000AK064014.1-Hypothetical protein2e-12At5g45030catalyticO.I.H.G.S.X.
0.2727.50.95Os10g0497600AK103003.1-Protein kinase domain containing protein1e-25At3g59110protein kinase family proteinO.I.H.G.S.X.
0.2727.50.95Os02g0200800AB118005.1-Targeting for Xklp2 family protein6e-8At4g32330-O.I.H.G.S.X.
0.2625.60.93Os03g0109400AK110678.1-Homeobox domain containing protein3e-14At1g52150ATHB-15O.I.H.G.S.X.
0.2625.60.94Os03g0833800AK066209.1-Glycoside hydrolase, family 28 protein1e-3At3g62110glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.H.G.S.X.
0.2625.60.94Os03g0287700AK058301.1-Hypothetical protein2e+0At2g39820eukaryotic translation initiation factor 6, putative / eIF-6, putativeO.I.H.G.S.X.
0.2321.20.92Os06g0291600AK100261.1-Protein kinase (EC 2.7.1.-) (Clone OSPK 4.4)(Fragment)2e-42At4g26610D6PKL1 (D6 PROTEIN KINASE LIKE 1)O.I.H.G.S.X.
0.2321.20.88Os01g0880300AK101962.1-Pectinesterase family protein2e-1At3g06830pectinesterase family proteinO.I.H.G.S.X.
0.2219.40.90Os10g0480200AY423716.1-Homeobox domain containing protein5e-25At5g60690REV (REVOLUTA)O.I.H.G.S.X.
0.1915.10.94Os03g0266800AK100780.1-Protein kinase domain containing protein7e-27At1g31420FEI1 (FEI 1)O.I.H.G.S.X.
0.1510.30.92Os04g0430000AK100142.1-Ser Thr specific protein kinase-like protein7e-8At4g01330ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.138.20.93Os01g0750000AY327044.1-Ras-related protein RIC21e-20At5g60860AtRABA1f (Arabidopsis Rab GTPase homolog A1f)O.I.H.G.S.X.
0.138.20.90Os10g0437600AF383878.1-Granule-bound starch synthase II, chloroplastprecursor (EC 2.4.1.21) (GBSSII)2e-15At3g01180AtSS2 (starch synthase 2)O.I.H.G.S.X.
0.094.90.91Os03g0773600AK103310.1-Kinesin, motor region domain containing protein4e-16At3g49650kinesin motor protein-relatedO.I.H.G.S.X.
0.094.90.91Os02g0741100AK071144.1-Heat shock protein DnaJ2e-8At1g24120ARL1 (ARG1-LIKE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.699.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0631GO:0006885Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.Link to AmiGO
0.0531GO:0006814The directed movement of sodium ions (Na+) into, out of, within or between cells.Link to AmiGO
0.0261GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage