Co-expression analysis

Gene ID Os07g0665700
Gene name
Homology with ArabidopsisSimilar to At1g13330: - (HF=1e+0)
Module size 6 genes
NF 0.22
%ile 20.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.96Os07g0665700NM_186077.1-Peptidase, trypsin-like serine and cysteineproteases domain containing protein1e+0At1g13330-O.I.H.G.S.X.
0.4458.10.96Os01g0225100AK100398.1-Smr protein/MutS2 C-terminal domain containingprotein3e-2At3g53650histone H2B, putativeO.I.H.G.S.X.
0.3846.90.96Os11g0207000AK065129.1-Conserved hypothetical protein3e-8At1g43850SEU (seuss)O.I.H.G.S.X.
0.1813.70.95Os04g0463600AK067018.1-Conserved hypothetical protein9e-1At1g31380-O.I.H.G.S.X.
0.116.50.96Os01g0235800AK058731.1-KH, type 1 domain containing protein3e-1At1g20450ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10)O.I.H.G.S.X.
0.073.70.96Os03g0241100AK103791.1-Myb, DNA-binding domain containing protein1e-13At2g36960TKI1 (TSL-kinase interacting protein 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.399.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.497.5GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
5.897.0GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
5.596.8GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.896.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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