Co-expression analysis

Gene ID Os07g0663900
Gene name
Homology with ArabidopsisSimilar to At5g44450: methyltransferase (HF=2e+0)
Module size 20 genes
NF 0.37
%ile 43.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.97Os07g06639009635.m04717-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g44450methyltransferaseO.I.H.G.S.X.
0.4458.10.98Os08g04077669636.m03149--8e-1At5g21280hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4458.10.98Os01g0289800NM_183592.1--3e+0At5g04440unknown proteinO.I.H.G.S.X.
0.4458.10.99Os08g01261009636.m00235--5e+0At2g35090unknown proteinO.I.H.G.S.X.
0.4152.40.99Os10g0437850NM_196674.1--9e-2At5g63480unknown proteinO.I.H.G.S.X.
0.4152.40.98Os11g02851009639.m01677--8e+0At5g16140peptidyl-tRNA hydrolase family proteinO.I.H.G.S.X.
0.3948.30.98Os08g03870009636.m02956--3e+0At3g13240unknown proteinO.I.H.G.S.X.
0.3846.90.98Os04g02987009632.m02154-Conserved hypothetical protein2e+0At5g64400-O.I.H.G.S.X.
0.3846.90.98Os06g06408009634.m04187-Cytochrome P450 family protein3e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.3846.90.98Os03g0600101NM_184856.1--6e+0At2g33380RD20 (RESPONSIVE TO DESSICATION 20)O.I.H.G.S.X.
0.3644.00.99Os09g03010009637.m01027--1e+0At2g26975copper transporter, putativeO.I.H.G.S.X.
0.3541.70.98Os10g01778009638.m00864--2e+0At1g04270RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15)O.I.H.G.S.X.
0.3338.80.98Os11g04898009639.m02690--1e-2At5g54540-O.I.H.G.S.X.
0.3032.70.97Os04g03597009632.m02744-Zinc-containing alcohol dehydrogenase superfamilyprotein5e-2At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.2931.10.99Os12g06060009640.m04040-Protein of unknown function DUF26 domaincontaining protein4e-4At5g06740lectin protein kinase family proteinO.I.H.G.S.X.
0.2931.10.98Os12g02583009640.m01518--7e+0At4g29240leucine-rich repeat family protein / extensin family proteinO.I.H.G.S.X.
0.2931.10.98Os03g02345009631.m01246-Haem peroxidase, plant/fungal/bacterial familyprotein3e-5At5g67400peroxidase 73 (PER73) (P73) (PRXR11)O.I.H.G.S.X.
0.2625.60.98Os12g06244009640.m04221--6e-1At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2625.60.98Os01g0754300AK108081.1-Hypothetical protein3e+0At4g36500unknown proteinO.I.H.G.S.X.
0.2422.40.97Os08g02752009636.m01743-Protein kinase domain containing protein1e-2At4g29240leucine-rich repeat family protein / extensin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
39.099.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
29.999.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
23.199.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.497.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
6.897.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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