Co-expression analysis

Gene ID Os07g0657500
Gene name
Homology with ArabidopsisSimilar to At5g64905: PROPEP3 (Elicitor peptide 3 precursor) (HF=3e-2)
Module size 10 genes
NF 0.11
%ile 8.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6987.90.91Os07g0657500AK058476.1--3e-2At5g64905PROPEP3 (Elicitor peptide 3 precursor)O.I.H.G.S.X.
0.2524.10.95Os07g0508200AK069914.1-Hypothetical protein2e-1At1g54215proline-rich family proteinO.I.H.G.S.X.
0.1813.70.94Os01g0899000AK121843.1-Pti1 kinase-like protein3e-40At2g43230serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.127.20.94Os01g0976000AK067175.1-The start codon is not identified.4e-9At2g28390SAND family proteinO.I.H.G.S.X.
0.116.50.93Os05g0400700AK072739.1-DNA-directed RNA polymerase II 19 kDa polypeptide(EC 2.7.7.6) (RNA polymerase II subunit 5)2e-21At5g59180NRPB7O.I.H.G.S.X.
0.094.90.93Os03g0773100AK065113.1-Myb/SANT domain protein2e-12At2g36960TKI1 (TSL-kinase interacting protein 1)O.I.H.G.S.X.
0.094.90.93Os02g0280100AK060301.1-Micro-fibrillar-associated 1, C-terminal domaincontaining protein4e-15At5g17900-O.I.H.G.S.X.
0.094.90.94Os08g0439100AK067282.1-Protein of unknown function DUF1336 domaincontaining protein1e-13At5g35180phosphoinositide bindingO.I.H.G.S.X.
0.073.70.93Os01g0859600AK072151.1-Cyclin-like F-box domain containing protein2e-5At1g67190F-box family proteinO.I.H.G.S.X.
0.052.50.93Os05g0558800AK066898.1-Conserved hypothetical protein1e-3At4g28910-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.698.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.497.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0441GO:0006350The synthesis of either RNA on a template of DNA or DNA on a template of RNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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