Co-expression analysis

Gene ID Os07g0638600
Gene name
Homology with ArabidopsisSimilar to At5g40150: peroxidase, putative (HF=6e-10)
Module size 10 genes
NF 0.18
%ile 16.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.76Os07g06386009635.m04465-Peroxidase 16e-10At5g40150peroxidase, putativeO.I.H.G.S.X.
0.4458.10.81Os04g0545700AU033092-Conserved hypothetical protein4e-1At5g50510-O.I.H.G.S.X.
0.3541.70.85Os05g01652009633.m00650-Conserved hypothetical protein4e+0At3g16570RALFL23 (ralf-like 23)O.I.H.G.S.X.
0.2524.10.85Os07g0682000AK110569.1-Heavy metal transport/detoxification proteindomain containing protein5e-1At4g08555unknown proteinO.I.H.G.S.X.
0.2422.40.86Os11g02702019639.m01552--9e-2At5g25460unknown proteinO.I.H.G.S.X.
0.2016.50.84Os03g06335009631.m04181-Auxin-responsive protein IAA17 (Indoleaceticacid-induced protein 17) (Auxin response 3)3e-4At1g04250AXR3 (AUXIN RESISTANT 3)O.I.H.G.S.X.
0.2016.50.85Os03g01345009631.m00332-Cytochrome p450 (CYP78A9)3e+0At2g46660CYP78A6O.I.H.G.S.X.
0.1510.30.85Os03g0810100AK070756.1-Isopentenyl transferase-like domain containingprotein8e-1At1g20470auxin-responsive family proteinO.I.H.G.S.X.
0.116.50.84Os05g04578009633.m03556-Phospholipid/glycerol acyltransferase familyprotein1e-11At3g11430GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5)O.I.H.G.S.X.
0.063.00.81Os08g0245200AK069932.1-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1)3e-10At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.499.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.398.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.697.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0871GO:0008033The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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