CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os07g0636600

Gene name
Homology with Arabidopsis Similar to At5g47920: unknown protein (HF=2e+0)

Module size 6 genes

NF 0.12

%ile 10.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.50 68.0 0.76 Os07g0636600 AK106022.1 - Plant disease resistance response protein familyprotein 2e+0 At5g47920 unknown protein O.I. H.G. S.X.
0.38 46.9 0.81 Os05g0163300 AK105598.1 - Beta-Ig-H3/fasciclin domain containing protein 6e-1 At1g29420 - O.I. H.G. S.X.
0.19 15.1 0.80 Os12g0561900 AK121202.1 - Conserved hypothetical protein 9e-1 At1g02813 unknown protein O.I. H.G. S.X.
0.13 8.2 0.74 Os02g0230300 AK058752.1 - En/Spm-like transposon protein (Protodermal factor1) 3e+0 At3g60010 ASK13 (ARABIDOPSIS SKP1-LIKE 13) O.I. H.G. S.X.
0.13 8.2 0.78 Os10g0109300 AK104730.1 - Peroxidase (EC 1.11.1.7) 5e-5 At1g14540 anionic peroxidase, putative O.I. H.G. S.X.
0.05 2.5 0.74 Os10g0150400 CF308064 - Protein of unknown function DUF1210 family protein 2e+0 At5g14340 AtMYB40 (myb domain protein 40) O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.3 98.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.0 98.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.1 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.3 98.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.0 98.2 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.074 1 GO:0007155 The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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