Co-expression analysis

Gene ID Os07g0632100
Gene name
Homology with ArabidopsisSimilar to At5g01530: chlorophyll A-B binding protein CP29 (LHCB4) (HF=5e+0)
Module size 6 genes
NF 0.65
%ile 87.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.99Os07g06321009635.m04398--5e+0At5g01530chlorophyll A-B binding protein CP29 (LHCB4)O.I.H.G.S.X.
0.7391.10.98Os11g07042009639.m04471--8e-1At5g58005unknown proteinO.I.H.G.S.X.
0.6787.20.99Os05g03089009633.m02163--3e+0At4g22950AGL19 (AGAMOUS-LIKE 19)O.I.H.G.S.X.
0.5573.70.99Os05g05285009633.m04232--2e-2At2g46130WRKY43O.I.H.G.S.X.
0.5068.00.98Os12g06399009640.m04362--2e-1At1g52827unknown proteinO.I.H.G.S.X.
0.5068.00.99Os05g04293009633.m03300--2e+0At5g18240MYR1 (MYb-related protein 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.299.3GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
17.998.9GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
16.598.8GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
16.198.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.398.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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