Co-expression analysis

Gene ID Os07g0608600
Gene name
Homology with ArabidopsisSimilar to At2g16005: MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (HF=3e+0)
Module size 7 genes
NF 0.66
%ile 88.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.99Os07g06086009635.m04180--3e+0At2g16005MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.
0.7391.10.99Os02g03092009630.m01972--3e+0At5g05365metal ion bindingO.I.H.G.S.X.
0.7189.60.99Os01g03604019629.m02512--3e+0At5g62830F-box family protein-relatedO.I.H.G.S.X.
0.4660.90.99Os12g05873009640.m03878-Hypothetical protein2e+0At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)O.I.H.G.S.X.
0.4458.11.00Os11g06112009639.m03623--1e-1At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)O.I.H.G.S.X.
0.4458.11.00Os01g0307600NM_189317.1--4e+0At3g59370unknown proteinO.I.H.G.S.X.
0.4458.11.00Os05g04895009633.m03841--4e+0At3g44735PSK1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.097.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.897.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
5.696.9GSM262005IAC165, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
5.596.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM262004IAC165, 4 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
4.596.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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