Co-expression analysis

Gene ID Os07g0608300
Gene name
Homology with ArabidopsisSimilar to At5g20520: WAV2 (WAVY GROWTH 2) (HF=1e-2)
Module size 20 genes
NF 0.31
%ile 33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7692.20.95Os07g0608300AK073927.1-Esterase/lipase/thioesterase domain containingprotein1e-2At5g20520WAV2 (WAVY GROWTH 2)O.I.H.G.S.X.
0.4863.70.97Os01g0600200AU165696-Ser/Thr specific protein phosphatase 2A Bregulatory subunit beta isoform4e-37At1g17720ATB BETAO.I.H.G.S.X.
0.4660.90.96Os03g0130500AK058465.1-Calcium-binding EF-hand domain containing protein1e-10At1g20760calcium-binding EF hand family proteinO.I.H.G.S.X.
0.4458.10.96Os08g0156700AK070710.1-VAP272e+0At4g00170vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.3846.90.97Os03g0825700AK067902.1-Defective in exine formation6e-40At3g09090DEX1 (DEFECTIVE IN EXINE FORMATION 1)O.I.H.G.S.X.
0.3745.00.96Os04g0502200AK066572.1-Conserved hypothetical protein1e-7At5g11040-O.I.H.G.S.X.
0.3541.70.96Os06g0167100AK059117.1-Gamma-adaptin, C-terminal domain containingprotein2e-33At1g60070binding / clathrin binding / protein binding / protein transporterO.I.H.G.S.X.
0.3134.50.97Os01g0511300AK069825.1-Proteasome component region PCI domain containingprotein2e-13At4g1900626S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.2931.10.97Os07g0620300AK099000.1-Clathrin adaptor complex, medium chain familyprotein8e-23At4g24550clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.2931.10.97Os05g0587100AK101645.1-Protein phosphatase 2C family protein3e-16At5g53140protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2831.10.96Os03g0112400AK063082.1-AP2 adaptor, appendage domain containing protein5e-2At5g22770alpha-ADR (alpha-adaptin)O.I.H.G.S.X.
0.2831.10.96Os06g0198800AK064781.1-Synaptobrevin family protein3e-13At1g11890SEC22O.I.H.G.S.X.
0.2831.10.96Os04g0684200AK101506.1-Protein kinase domain containing protein6e-18At1g63500ATP binding / binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.2727.50.97Os01g0708100AK101457.1-N-myristoyltransferase 1(N-myristoyltransferase-like protein)7e-14At5g57020NMT1 (MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE)O.I.H.G.S.X.
0.2625.60.97Os08g0550100AK058374.1-Proteasome component region PCI domain containingprotein3e-28At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)O.I.H.G.S.X.
0.2422.40.97Os06g0598900AK105052.1-WD40-like domain containing protein3e+0At1g02950ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4)O.I.H.G.S.X.
0.2219.40.97Os04g0433900CB683883-Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2)2e+0At4g16880disease resistance protein-relatedO.I.H.G.S.X.
0.2219.40.96Os06g0218100AK058667.1-Hypothetical protein2e-3At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.2016.50.97Os03g0810600AK101920.1-Ras small GTPase, Ras type family protein3e-23At5g27540MIRO1 (Miro-related GTP-ase 1)O.I.H.G.S.X.
0.149.30.97Os07g0496000AK111986.1-Nt-rab6 protein9e-68At2g44610RAB6AO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.899.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.698.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.097.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0801GO:0006461The aggregation, arrangement and bonding together of a set of components to form a protein complex.Link to AmiGO
0.0582GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO
0.0543GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage