Co-expression analysis

Gene ID Os07g0568600
Gene name
Homology with ArabidopsisSimilar to At2g41860: CPK14 (HF=4e-25)
Module size 11 genes
NF 0.41
%ile 50.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.92Os07g0568600AK068315.1-Calcium-dependent protein kinase4e-25At2g41860CPK14O.I.H.G.S.X.
0.6987.90.93Os02g0324700CR288909-Conserved hypothetical protein1e+0At1g06980unknown proteinO.I.H.G.S.X.
0.4863.70.92Os03g0187600AK068057.1-GRAM domain containing protein6e-1At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.4863.70.94Os01g0672400AK064817.1-Drought induced 19 family protein3e-1At4g32090galactosyltransferaseO.I.H.G.S.X.
0.4762.30.92Os04g0584600AB042550.1-Calcium dependent protein kinase3e-44At2g17290CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.4051.10.92Os12g0131100AK105856.1-Glucosamine--fructose-6-phosphate aminotransferase[isomerizing] (EC 2.6.1.16) (Hexosephosphateaminotransferase) (D-fructose-6- phosphateamidotransferase) (GFAT)3e-12At3g24090glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminaseO.I.H.G.S.X.
0.3846.90.92Os01g0776700CR290397-Conserved hypothetical protein7e-3At3g44950glycine-rich proteinO.I.H.G.S.X.
0.3644.00.92Os01g0606100NM_192692.1-Conserved hypothetical protein2e-1At5g44450methyltransferaseO.I.H.G.S.X.
0.3236.30.92Os01g0261200AB028187.1-No apical meristem (NAM) protein domain containingprotein7e-5At3g10490anac052 (Arabidopsis NAC domain containing protein 52)O.I.H.G.S.X.
0.2931.10.92Os06g0663200AK100479.1-Protein kinase APK1A (EC 2.7.1.-)3e-10At3g28690protein kinase, putativeO.I.H.G.S.X.
0.2931.10.92Os08g0480100AU173407-Signal recognition particle receptor protein(Fragment)1e-8At4g30600signal recognition particle receptor alpha subunit family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.198.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.898.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1251GO:0006614The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.Link to AmiGO
0.0191GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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