Co-expression analysis

Gene ID Os07g0557200
Gene name
Homology with ArabidopsisSimilar to At4g05120: FUR1 (FUDR RESISTANT 1) (HF=8e-5)
Module size 6 genes
NF 0.43
%ile 54.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.86Os07g0557200AK101098.1-Delayed-early response protein/equilibrativenucleoside transporter family protein8e-5At4g05120FUR1 (FUDR RESISTANT 1)O.I.H.G.S.X.
0.7189.60.85Os09g0255000AK069080.1-Cell wall invertase (EC 3.2.1.26)4e+0At5g4004060S acidic ribosomal protein P2 (RPP2E)O.I.H.G.S.X.
0.5573.70.86Os09g0461700AK066139.1-Esterase/lipase/thioesterase domain containingprotein2e-1At5g16080AtCXE17 (Arabidopsis thaliana carboxyesterase 17)O.I.H.G.S.X.
0.3541.70.87Os03g0854600AK104577.1-Glycoside hydrolase, family 16 domain containingprotein7e-1At3g50820PSBO2 (PHOTOSYSTEM II SUBUNIT O-2)O.I.H.G.S.X.
0.3338.80.87Os06g0534800AK120650.1-Ankyrin repeat containing protein3e+0At5g23100unknown proteinO.I.H.G.S.X.
0.2524.10.86Os09g0403000AK111051.1-Conserved hypothetical protein1e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.798.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.398.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.25142.3.S1_at, orthologous to the query gene, Os07g0557200

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.6Ta.25142.3.S1_atAt4g05120--2e-1At5g65590Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.4767.9TaAffx.84778.1.S1_atAt4g05120--9e-1At3g53610ATRAB8O.I.H.G.S.X.
0.4464.5TaAffx.65688.1.S1_x_atAt4g05120--2e+1At3g02480ABA-responsive protein-relatedO.I.H.G.S.X.
0.4260.9TaAffx.50779.1.S1_atAt4g05120--3e+0At5g55460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4058.4TaAffx.78428.1.S1_atAt4g05120--1e+0At4g15610integral membrane family proteinO.I.H.G.S.X.
0.3753.0TaAffx.112386.1.S1_atAt4g05120--3e-1At2g25280-O.I.H.G.S.X.
0.3346.9TaAffx.114123.1.S1_x_atAt4g05120--4e-3At2g46790APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9)O.I.H.G.S.X.
0.3346.9Ta.2138.2.S1_atAt4g05120--1e+0At1g55840SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer proteinO.I.H.G.S.X.
0.3346.9TaAffx.78822.1.S1_atAt4g05120--1e+0At5g01075beta-galactosidaseO.I.H.G.S.X.
0.3244.4TaAffx.107438.1.S1_atAt4g05120--1e-2At3g26110-O.I.H.G.S.X.
0.3244.4TaAffx.57555.1.S1_atAt4g05120--2e+1At5g67600unknown proteinO.I.H.G.S.X.
0.3040.9TaAffx.111311.1.S1_atAt4g05120--1e+0At1g61940AtTLP4 (TUBBY LIKE PROTEIN 4)O.I.H.G.S.X.
0.2633.6TaAffx.31212.1.S1_atAt4g05120--7e+0At5g20820auxin-responsive protein-relatedO.I.H.G.S.X.
0.2329.0TaAffx.82721.1.S1_atAt4g05120--3e+1At4g20780calcium-binding protein, putativeO.I.H.G.S.X.
0.2227.1Ta.5807.2.S1_atAt4g05120--3e+0At5g43410ethylene-responsive factor, putativeO.I.H.G.S.X.
0.1415.8Ta.16201.1.S1_atAt4g05120--3e+0At5g57535unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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