Co-expression analysis

Gene ID Os07g0557200
Gene name
Homology with ArabidopsisSimilar to At4g05120: FUR1 (FUDR RESISTANT 1) (HF=8e-5)
Module size 6 genes
NF 0.43
%ile 54.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.86Os07g0557200AK101098.1-Delayed-early response protein/equilibrativenucleoside transporter family protein8e-5At4g05120FUR1 (FUDR RESISTANT 1)O.I.H.G.S.X.
0.7189.60.85Os09g0255000AK069080.1-Cell wall invertase (EC 3.2.1.26)4e+0At5g4004060S acidic ribosomal protein P2 (RPP2E)O.I.H.G.S.X.
0.5573.70.86Os09g0461700AK066139.1-Esterase/lipase/thioesterase domain containingprotein2e-1At5g16080AtCXE17 (Arabidopsis thaliana carboxyesterase 17)O.I.H.G.S.X.
0.3541.70.87Os03g0854600AK104577.1-Glycoside hydrolase, family 16 domain containingprotein7e-1At3g50820PSBO2 (PHOTOSYSTEM II SUBUNIT O-2)O.I.H.G.S.X.
0.3338.80.87Os06g0534800AK120650.1-Ankyrin repeat containing protein3e+0At5g23100unknown proteinO.I.H.G.S.X.
0.2524.10.86Os09g0403000AK111051.1-Conserved hypothetical protein1e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.798.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.398.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.36878.1.S1_at, orthologous to the query gene, Os07g0557200

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4665.5GmaAffx.36878.1.S1_atAt4g05120--7e-4At4g05130equilibrative nucleoside transporter, putative (ENT4)O.I.H.G.S.X.
0.4665.5Gma.5605.1.S1_atAt4g05120--2e-13At3g02210COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)O.I.H.G.S.X.
0.1923.7Gma.1458.1.S1_atAt4g05120--6e-42At1g76160sks5 (SKU5 Similar 5)O.I.H.G.S.X.
0.1215.1Gma.10796.2.S1_x_atAt4g05120--0At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)O.I.H.G.S.X.
0.1114.2GmaAffx.85140.1.S1_atAt4g05120--3e-44At5g60920COB (COBRA)O.I.H.G.S.X.
0.058.0GmaAffx.35303.1.S1_atAt4g05120--1e-3At4g05130equilibrative nucleoside transporter, putative (ENT4)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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