Co-expression analysis

Gene ID Os07g0555400
Gene name
Homology with ArabidopsisSimilar to At3g11550: integral membrane family protein (HF=9e-1)
Module size 6 genes
NF 0.26
%ile 26.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.98Os07g0555400AK070977.1-Hypothetical protein9e-1At3g11550integral membrane family proteinO.I.H.G.S.X.
0.4458.10.98Os07g0517400NM_187402.1-Calponin-like actin-binding domain containingprotein2e+0At5g35360CAC2O.I.H.G.S.X.
0.3134.50.98Os03g0220300AK064657.1-Hypothetical protein6e-2At1g61160-O.I.H.G.S.X.
0.2524.10.98Os05g05690009633.m04629--7e-1At3g30350unknown proteinO.I.H.G.S.X.
0.1712.60.98Os02g0708500AK106720.1-Conserved hypothetical protein2e-1At4g20900MS5 (MALE-STERILE 5)O.I.H.G.S.X.
0.105.70.98Os10g01681009638.m00734--8e+0At5g28360ACS3 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE LIKE PSEUDOGENE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.999.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
30.799.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.498.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.698.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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