Co-expression analysis

Gene ID Os07g0554600
Gene name
Homology with ArabidopsisSimilar to At3g60530: zinc finger (GATA type) family protein (HF=2e-1)
Module size 6 genes
NF 0.56
%ile 75.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.99Os07g0554600AK072955.1-Hypothetical protein2e-1At3g60530zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.8094.60.99Os11g0198900AK107759.1-Hypothetical protein6e+0At5g38800AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43)O.I.H.G.S.X.
0.6787.20.99Os08g0500600AK103480.1-PPR repeat containing protein4e-6At1g14470pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.4660.90.99Os08g05275009636.m04223--4e+0At2g35215unknown proteinO.I.H.G.S.X.
0.4253.90.99Os07g01321009635.m00325-Protein kinase family protein7e-2At1g70130lectin protein kinase, putativeO.I.H.G.S.X.
0.4051.10.99Os07g05503009635.m03611-Cyclin-like F-box domain containing protein3e+0At4g11870unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
48.099.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
45.599.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
30.399.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.498.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.398.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.898.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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