Co-expression analysis

Gene ID Os07g0549700
Gene name
Homology with ArabidopsisSimilar to At3g42050: vacuolar ATP synthase subunit H family protein (HF=1e-12)
Module size 10 genes
NF 0.72
%ile 94.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.97Os07g0549700AK104331.1-ARM repeat fold domain containing protein1e-12At3g42050vacuolar ATP synthase subunit H family proteinO.I.H.G.S.X.
0.8295.00.97Os05g0593100AK061855.1-Vacuolar ATP synthase subunit C (EC C subunit) (Vacuolar proton pump C subunit)2e-10At1g12840DET3 (DE-ETIOLATED 3)O.I.H.G.S.X.
0.8094.60.98Os11g0169900U27098.1-Vacuolar ATP synthase 16 kDa proteolipid subunit(EC (V- ATPase 16 kDa proteolipid subunit)(Fragment)4e-63At1g75630AVA-P4O.I.H.G.S.X.
0.7893.40.98Os06g0662000AK071775.1-Vacuolar ATP synthase catalytic subunit A (EC3.6.3.14) (V-ATPase A subunit) (Vacuolar proton pumpalpha subunit) (V-ATPase 69 kDa subunit)0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.7491.40.97Os01g0610100AK059810.1-Vacuolar ATP synthase 21 kDa proteolipid subunit(EC (23-kDa subunit of V-ATPase)4e-23At2g25610H+-transporting two-sector ATPase, C subunit family proteinO.I.H.G.S.X.
0.7189.60.98Os01g0587000AK067605.1-Vacuolar ATP synthase subunit d (EC d subunit) (Vacuolar proton pump d subunit)(V-ATPase 41 KDa accessory protein) (DVA41)2e-75At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.6787.20.98Os12g0168900AK071641.1--4e-51At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)O.I.H.G.S.X.
0.6382.70.97Os11g0127700AK103742.1-Hypothetical protein2e-1At1g49480RTV1 (related to vernalization1 1)O.I.H.G.S.X.
0.6382.70.97Os02g0586400L35845.1-Small GTP binding protein Rab27e-87At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)O.I.H.G.S.X.
0.5068.00.98Os06g0568200AF375052.1-Vacuolar ATPase B subunit4e-111At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.497.9GSM154829Root_DMSO-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in riceLink to GEO
9.197.9GSM154832Root_DMSO-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
8.797.8GSM154831Root_DMSO-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO
7.697.5GSM154944Root_tZ-treatment_120min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
7.597.5GSM154943Root_tZ-treatment_120min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO
7.397.5GSM154942Root_tZ-treatment_120min_replicate 1GSE6719Cytokinin responsive genes in riceLink to GEO
6.797.3GSM1952305d-seedGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
6.697.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM278850KT95-418-RSV infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infectionLink to GEO
6.597.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2223GO:0006818The directed movement of hydrogen (H2 or H+), into, out of, within or between cells.Link to AmiGO
0.1821GO:0015988The transport of protons against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.Link to AmiGO
0.1112GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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