CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os07g0543700

Gene name
Homology with Arabidopsis Similar to At5g38760: unknown protein (HF=6e-1)

Module size 6 genes

NF 0.68

%ile 91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.77 93.1 0.76 Os07g0543700 AK105710.1 - Conserved hypothetical protein 6e-1 At5g38760 unknown protein O.I. H.G. S.X.
0.91 98.9 0.77 Os06g0271500 AK065764.1 - En/Spm-like transposon proteins family protein 2e-1 At3g57785 unknown protein O.I. H.G. S.X.
0.50 68.0 0.86 Os12g0631800 AK067318.1 - Phytoene dehydrogenase-like 9e-14 At5g49555 amine oxidase-related O.I. H.G. S.X.
0.50 68.0 0.88 Os01g0148400 NM_184361.1 - Brix domain containing protein 9e-1 At5g62660 F-box family protein O.I. H.G. S.X.
0.44 58.1 0.86 Os11g0686100 AK105797.1 - Conserved hypothetical protein 3e+0 At5g10030 TGA4 (TGACG MOTIF-BINDING FACTOR 4) O.I. H.G. S.X.
0.40 51.1 0.79 Os11g0695900 AK101888.1 - Importin-beta, N-terminal domain containingprotein 5e-1 At3g17340 binding / protein transporter O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.1 99.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.9 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.7 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.0 98.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.5 98.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.5 98.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.1 98.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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