Co-expression analysis

Gene ID Os07g0541800
Gene name
Homology with ArabidopsisSimilar to At4g04540: protein kinase family protein (HF=5e-6)
Module size 6 genes
NF 0.63
%ile 85.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.87Os07g0541800AK102941.1-KI domain interacting kinase 15e-6At4g04540protein kinase family proteinO.I.H.G.S.X.
0.6787.20.88Os10g0510100NM_197298.1--1e-1At1g76220unknown proteinO.I.H.G.S.X.
0.5777.00.84Os05g0263100CB672928--1e-2At4g04960lectin protein kinase, putativeO.I.H.G.S.X.
0.5371.30.86Os10g0407200AK101309.1-Protein of unknown function DUF962 family protein8e-3At2g39320OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.5068.00.91Os03g0293600AK109072.1-Hypothetical protein1e-1At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.4863.70.86Os04g0481800AK109152.1-Membrane bound O-acyl transferase, MBOAT familyprotein1e+1At4g38090unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.399.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.198.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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