Co-expression analysis

Gene ID Os07g0541700
Gene name
Homology with ArabidopsisSimilar to At4g23260: ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (HF=5e-4)
Module size 10 genes
NF 0.26
%ile 25.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.78Os07g0541700AK105128.1-Receptor-like protein kinase 55e-4At4g23260ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.4762.30.86Os09g0460700AK108359.1-Esterase/lipase/thioesterase domain containingprotein5e-1At3g48700ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13)O.I.H.G.S.X.
0.3846.90.84Os11g0684100AK121102.1--6e-1At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.3338.80.81Os09g0240200AB001887.1-Zn-finger, CONSTANS type domain containing protein7e-1At5g15840CO (CONSTANS)O.I.H.G.S.X.
0.3236.30.81Os07g0510800AK058358.1-RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein1e-1At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.1813.70.85Os01g0352100AK072222.1-2OG-Fe(II) oxygenase domain containing protein7e-1At3g47650bundle-sheath defective protein 2 family / bsd2 familyO.I.H.G.S.X.
0.1712.60.85Os08g04748009636.m03717-Esterase/lipase/thioesterase domain containingprotein6e-1At4g36500unknown proteinO.I.H.G.S.X.
0.1510.30.80Os06g0607100AK071250.1-Conserved hypothetical protein4e-8At3g15820phosphatidic acid phosphatase-related / PAP2-relatedO.I.H.G.S.X.
0.149.30.82Os09g0355400AK099784.1-Protein kinase domain containing protein6e-3At3g24790ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseO.I.H.G.S.X.
0.149.30.82Os02g0700400AB074005.1-Alternative oxidase AOX16e-4At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
62.999.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
44.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.698.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.997.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1331GO:0007585The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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