Co-expression analysis

Gene ID Os07g0541500
Gene name
Homology with ArabidopsisSimilar to At4g23190: CRK11 (CYSTEINE-RICH RLK11) (HF=3e-4)
Module size 7 genes
NF 0.22
%ile 21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.76Os07g0541500AK111550.1-KI domain interacting kinase 13e-4At4g23190CRK11 (CYSTEINE-RICH RLK11)O.I.H.G.S.X.
0.3134.50.81Os07g0541700AK105128.1-Receptor-like protein kinase 55e-4At4g23260ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.2524.10.84Os11g0223400AK112108.1-Hypothetical protein3e+0At5g28050cytidine/deoxycytidylate deaminase family proteinO.I.H.G.S.X.
0.2321.20.80Os02g06099009630.m03819-Leucine-rich repeat, typical subtype containingprotein3e+0At5g07280EMS1 (EXCESS MICROSPOROCYTES1)O.I.H.G.S.X.
0.2016.50.83Os01g0359600NM_194003.1--1e-1At1g73500MKK9 (MAP KINASE KINASE 9)O.I.H.G.S.X.
0.116.50.80Os01g0601700AK072103.1-Leucine-rich repeat, typical subtype containingprotein6e+0At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.094.90.83Os01g0366100AK067903.1-Hypothetical protein5e-1At1g43860transcription factorO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.3134.50.83Os01g0947700AK066757.1-Beta-1,3-glucanase4e-1At5g66780unknown proteinO.I.H.G.S.X.
0.3134.50.89Os08g0534900AK101573.1-ARM repeat fold domain containing protein9e-1At3g46150unknown proteinO.I.H.G.S.X.
0.2727.50.80Os11g0626700AK120168.1-Hypothetical protein1e+1At5g05500pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.2117.90.68Os12g04992009640.m03053-Hypothetical protein3e-3At5g19260unknown proteinO.I.H.G.S.X.
0.2117.90.79Os08g01701009636.m00670-Disease resistance protein family protein4e-1At4g21105cytochrome-c oxidase/ electron carrierO.I.H.G.S.X.
0.2117.90.72Os01g0117200AK120089.1-ARK protein (Fragment)1e-3At5g18610protein kinase family proteinO.I.H.G.S.X.
0.1813.70.66Os02g06154009630.m03879-Leucine-rich repeat, plant specific containingprotein2e+0At1g25370unknown proteinO.I.H.G.S.X.
0.1813.70.68Os02g0615500AK100073.1-Protein kinase domain containing protein1e-1At2g01918calcium ion bindingO.I.H.G.S.X.
0.1712.60.76Os01g0151400AK120703.1-Gamma-glutamyltransferase (EC 2.3.2.2)1e+0At4g39640GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1)O.I.H.G.S.X.
0.1611.30.71Os09g0343400AK099726.1-Hypothetical protein3e-1At1g17720ATB BETAO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
99.5100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.598.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.298.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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