Co-expression analysis

Gene ID Os07g0541500
Gene name
Homology with ArabidopsisSimilar to At4g23190: CRK11 (CYSTEINE-RICH RLK11) (HF=3e-4)
Module size 7 genes
NF 0.22
%ile 21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.76Os07g0541500AK111550.1-KI domain interacting kinase 13e-4At4g23190CRK11 (CYSTEINE-RICH RLK11)O.I.H.G.S.X.
0.3134.50.81Os07g0541700AK105128.1-Receptor-like protein kinase 55e-4At4g23260ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.2524.10.84Os11g0223400AK112108.1-Hypothetical protein3e+0At5g28050cytidine/deoxycytidylate deaminase family proteinO.I.H.G.S.X.
0.2321.20.80Os02g06099009630.m03819-Leucine-rich repeat, typical subtype containingprotein3e+0At5g07280EMS1 (EXCESS MICROSPOROCYTES1)O.I.H.G.S.X.
0.2016.50.83Os01g0359600NM_194003.1--1e-1At1g73500MKK9 (MAP KINASE KINASE 9)O.I.H.G.S.X.
0.116.50.80Os01g0601700AK072103.1-Leucine-rich repeat, typical subtype containingprotein6e+0At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.094.90.83Os01g0366100AK067903.1-Hypothetical protein5e-1At1g43860transcription factorO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
99.5100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.598.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.298.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1621903_at, orthologous to the query gene, Os07g0541500

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6484.71621903_atAt4g23190UPF0497 membrane protein 15-2e+0At4g09170unknown proteinO.I.H.G.S.X.
0.3243.11621179_atAt4g23190--2e-1At4g09070-O.I.H.G.S.X.
0.2837.71610936_atAt4g23190hypothetical protein LOC100259946-2e-1At3g14870unknown proteinO.I.H.G.S.X.
0.2632.01621051_atAt4g23190hypothetical protein LOC100260608-4e-4At4g15260UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.H.G.S.X.
0.2428.71614764_atAt4g23190hexose transporter HT2-9e-5At1g34580monosaccharide transporter, putativeO.I.H.G.S.X.
0.2327.51615277_atAt4g23190--4e-31At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.2327.51614959_atAt4g23190hypothetical protein LOC100257499-1e-10At5g47060senescence-associated protein-relatedO.I.H.G.S.X.
0.2225.61618189_atAt4g23190--3e-2At5g10540peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.2225.61608286_atAt4g23190hypothetical protein LOC100253910-1e+0At2g32050cell cycle control protein-relatedO.I.H.G.S.X.
0.2124.01613776_atAt4g23190hypothetical LOC100254074-3e-9At1g19850MP (MONOPTEROS)O.I.H.G.S.X.
0.1920.91607560_atAt4g23190hypothetical protein LOC100255800-5e-12At3g59030TT12 (TRANSPARENT TESTA 12)O.I.H.G.S.X.
0.1819.41608973_atAt4g23190hypothetical LOC100259334-3e-4At1g71010phosphatidylinositol-4-phosphate 5-kinase family proteinO.I.H.G.S.X.
0.1313.31613355_atAt4g23190hypothetical protein LOC100260952-6e-12At5g07360amidase family proteinO.I.H.G.S.X.
0.088.51613182_atAt4g23190hypothetical protein LOC100266622-5e-18At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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