Co-expression analysis

Gene ID Os07g0518500
Gene name
Homology with ArabidopsisSimilar to At5g15830: AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3) (HF=9e-1)
Module size 18 genes
NF 0.10
%ile 7.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8996.90.75Os07g0518500AK099924.1-Cytochrome P450 family protein9e-1At5g15830AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)O.I.H.G.S.X.
0.2931.10.86Os12g0438300AK067669.1-Disease resistance protein family protein3e+0At3g60090VQ motif-containing proteinO.I.H.G.S.X.
0.2727.50.82Os10g05479009638.m03624-Short-chain dehydrogenase Tic322e-3At5g02540short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.1915.10.89Os09g0511700AK101420.1-Glycoside hydrolase, family 1 protein4e-3At1g02850BGLU11 (BETA GLUCOSIDASE 11)O.I.H.G.S.X.
0.1712.60.89Os07g0180300AK065026.1-Protein of unknown function DUF594 family protein3e-1At4g19080unknown proteinO.I.H.G.S.X.
0.149.30.88Os09g0313500AK065687.1-Disease resistance protein family protein5e-1At2g42390protein kinase C substrate, heavy chain-relatedO.I.H.G.S.X.
0.127.20.84Os11g0607200AK111536.1-Protein kinase domain containing protein8e-2At5g65240kinaseO.I.H.G.S.X.
0.127.20.85Os07g0541400AK111650.1-Receptor protein kinase3e-4At4g23280protein kinase, putativeO.I.H.G.S.X.
0.116.50.89Os03g0201600AK065564.1-SUA5/yciO/yrdC, N-terminal domain containingprotein2e-7At5g60590yrdC protein-relatedO.I.H.G.S.X.
0.094.90.89Os02g0636300AK100670.1-DEAD/DEAH box helicase, N-terminal domaincontaining protein4e-3At1g12770EMB1586 (embryo defective 1586)O.I.H.G.S.X.
0.094.90.86Os01g0764900AK066796.1-Formamidase-like protein2e-27At4g37550formamidase, putative / formamide amidohydrolase, putativeO.I.H.G.S.X.
0.094.90.85Os01g0782200AK107062.1-Diacylglycerol kinase, catalytic region domaincontaining protein3e-13At4g21540SPHK1 (SPHINGOSINE KINASE 1)O.I.H.G.S.X.
0.084.20.83Os06g0329900AK068748.1-SAM dependent carboxyl methyltransferase familyprotein3e+0At2g17055disease resistance protein-relatedO.I.H.G.S.X.
0.073.70.88Os12g0182300AK067635.1-Protein kinase domain containing protein9e-15At1g34420leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.063.00.83Os10g0389000AK065782.1-Centrin2e+0At4g01700chitinase, putativeO.I.H.G.S.X.
0.042.00.86Os01g0290000AK066523.1-Cyprosin precursor (EC 3.4.23.-) (Fragment)8e-14At1g11910aspartyl protease family proteinO.I.H.G.S.X.
0.042.00.88Os01g0874100AK105804.1-Deoxynucleoside kinase family protein5e-27At1g72040deoxynucleoside kinase familyO.I.H.G.S.X.
0.031.40.86Os03g0269100AK069762.1-Short chain alcohol dehydrogenase-like4e-5At5g06060tropinone reductase, putative / tropine dehydrogenase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.699.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
23.899.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0711GO:0007205The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand.Link to AmiGO
0.0141GO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.Link to AmiGO
0.0121GO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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