Co-expression analysis

Gene ID Os07g0508200
Gene name
Homology with ArabidopsisSimilar to At1g54215: proline-rich family protein (HF=2e-1)
Module size 6 genes
NF 0.32
%ile 35.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.95Os07g0508200AK069914.1-Hypothetical protein2e-1At1g54215proline-rich family proteinO.I.H.G.S.X.
0.7391.10.96Os05g0472300AK071966.1-Ribonuclease P subunit family protein7e-1At5g56760ATSERAT1O.I.H.G.S.X.
0.5068.00.96Os06g0583400AF513382.1-Histone deacetylase HDAC16e-61At4g38130HD1 (HISTONE DEACETYLASE 1)O.I.H.G.S.X.
0.3644.00.96Os09g0436400AK102877.1-PDZ/DHR/GLGF domain containing protein6e-2At1g46408AGL97 (AGAMOUS-LIKE 97)O.I.H.G.S.X.
0.1510.30.96Os04g0465000AK060688.1-Sterile alpha motif SAM domain containing protein3e+0At3g48209-O.I.H.G.S.X.
0.149.30.95Os04g0531700AK119481.1-Glucose/ribitol dehydrogenase family protein4e+0At4g23430short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.699.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.697.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0016575The modification of histones by removal of acetyl groups.Link to AmiGO
0.1051GO:0008033The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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