Co-expression analysis

Gene ID Os07g0501100
Gene name
Homology with ArabidopsisSimilar to At2g14247: Expressed protein (HF=2e-1)
Module size 6 genes
NF 0.01
%ile 0.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.81Os07g0501100AK110924.1-Chalcone synthase (EC 2.3.1.74)(Naregenin-chalcone synthase)2e-1At2g14247Expressed proteinO.I.H.G.S.X.
0.042.00.92Os02g05465009630.m03258-Conserved hypothetical protein2e+0At2g35640hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.010.50.91Os01g09287009629.m06954-Aminotransferase, class I and II domain containingprotein4e-18At5g23670LCB2O.I.H.G.S.X.
0.010.50.83Os12g0489800AK102385.1-NBS-LRR protein (Fragment)2e+0At5g63225-O.I.H.G.S.X.
-0.10.91Os03g0199200AK109717.1--1e+1At4g08455BTB/POZ domain-containing proteinO.I.H.G.S.X.
-0.10.88Os04g0456200CB967429-TMV induced protein 1-25e+0At5g17060ATARFB1BO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
43.999.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
16.198.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.398.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0292GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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