Co-expression analysis

Gene ID Os07g0498400
Gene name
Homology with ArabidopsisSimilar to At4g20140: GSO1 (GASSHO1) (HF=5e-10)
Module size 6 genes
NF 0.21
%ile 19.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.92Os07g0498400NM_187384.1-Protein kinase domain containing protein5e-10At4g20140GSO1 (GASSHO1)O.I.H.G.S.X.
0.4660.90.90Os04g0410600AK121649.1-Purple acid phosphatase6e-8At3g52820PAP22 (PURPLE ACID PHOSPHATASE 22)O.I.H.G.S.X.
0.4458.10.92Os02g07070009630.m04653-Monodehydroascorbate reductase, seedling isozyme(EC 1.6.5.4) (MDAR seedling) (Ascorbate free radicalreductase seedling) (AFR reductase seedling)7e-1At3g52880monodehydroascorbate reductase, putativeO.I.H.G.S.X.
0.2219.40.92Os05g0400500AK062513.1-Hypothetical protein1e+0At5g20100unknown proteinO.I.H.G.S.X.
0.116.50.92Os12g05410009640.m03442-Lumazine-binding protein family protein2e+0At5g54530unknown proteinO.I.H.G.S.X.
0.073.70.91Os07g0586800NM_187025.1-Conserved hypothetical protein7e+0At5g62070IQD23 (IQ-domain 23)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.497.5GSM195226RootGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
6.997.3GSM359907FL478 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
6.897.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.697.3GSM359911IR29 root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
6.497.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM159179Root, 7-day-old Seedling, biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
6.097.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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