Co-expression analysis

Gene ID Os07g0495100
Gene name
Homology with ArabidopsisSimilar to At5g47080: CKB1 (HF=4e-83)
Module size 29 genes
NF 0.21
%ile 19.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.92Os07g0495100AK121850.1-Possible protein kinase CK2 regulatory subunit(Fragment)4e-83At5g47080CKB1O.I.H.G.S.X.
0.6787.20.94Os07g0530300AK109327.1-Conserved hypothetical protein2e+0At4g19840ATPP2-A1O.I.H.G.S.X.
0.3644.00.95Os03g0826700AK071165.1-SAM (and some other nucleotide) binding motifdomain containing protein1e+1At5g01470unknown proteinO.I.H.G.S.X.
0.3541.70.94Os04g0584800AK102568.1-GTP1/OBG domain containing protein5e-5At5g65960unknown proteinO.I.H.G.S.X.
0.3338.80.93Os01g0604700AK071681.1-Conserved hypothetical protein4e-15At3g02420unknown proteinO.I.H.G.S.X.
0.3236.30.96Os11g0114700AK070834.1-PAP/25A core domain containing protein4e-23At3g51620-O.I.H.G.S.X.
0.3236.30.94Os05g0443300CB621506-Sec23/Sec24 trunk region domain containing protein4e-13At2g27460sec23/sec24 transport family proteinO.I.H.G.S.X.
0.3032.70.94Os09g0392100AK100117.1-Lipase, class 3 family protein1e+0At4g19038LCR15 (Low-molecular-weight cysteine-rich 15)O.I.H.G.S.X.
0.2831.10.95Os02g0184000AK072584.1-Zn-finger, DHHC type domain containing protein1e-46At5g20350TIP1 (TIP GROWTH DEFECTIVE 1)O.I.H.G.S.X.
0.2727.50.96Os12g0277400AK102429.1-The start codon is not identified.5e-4At1g76390armadillo/beta-catenin repeat family protein / U-box domain-containing proteinO.I.H.G.S.X.
0.2321.20.95Os07g0476500AK066346.1-Peptidyl-prolyl cis-trans isomerase, cyclophilintype domain containing protein1e-5At3g66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.
0.2219.40.96Os04g0681900AK105775.1-Acyl-CoA binding protein8e-10At5g53470ACBP1 (ACYL-COA BINDING PROTEIN 1)O.I.H.G.S.X.
0.2117.90.95Os12g0618300AK103368.1-GTP-binding protein-like (Fragment)1e-37At2g27200GTP-binding family proteinO.I.H.G.S.X.
0.2016.50.96Os08g0333000AK108356.1-F7O18.23 protein (SWP1) (Struwwelpeter 1 protein)1e-25At3g04740SWP (STRUWWELPETER)O.I.H.G.S.X.
0.1915.10.94Os12g0112600AK068644.1-Hypothetical protein1e-1At4g23150protein kinase family proteinO.I.H.G.S.X.
0.1915.10.94Os06g0645700AK108404.1-HAF15e-1At5g17810WOX12 (WUSCHEL related homeobox 12)O.I.H.G.S.X.
0.1813.70.96Os12g0197900AK059540.1-Conserved hypothetical protein3e-5At5g18420unknown proteinO.I.H.G.S.X.
0.1813.70.95Os06g0164100AK064345.1-Serine/threonine protein phosphatase PP1 (EC3.1.3.16)4e-55At1g64040TOPP3O.I.H.G.S.X.
0.1813.70.95Os02g0516600AK068618.1-Zn-finger, RING domain containing protein5e-3At3g26730zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1813.70.96Os04g0488000AK111619.1-PITSLRE serine/threonine-protein kinase CDC2L1 (EC2.7.1.37) (Galactosyltransferase associated proteinkinase p58/GTA) (Cell division cycle 2-like 1)2e-71At1g67580protein kinase family proteinO.I.H.G.S.X.
0.1712.60.94Os07g0232200AK103406.1-Cytochrome b5 domain containing protein4e-8At5g09680cytochrome b5 domain-containing proteinO.I.H.G.S.X.
0.1712.60.96Os04g0527500AK059144.1-Hypothetical protein3e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)O.I.H.G.S.X.
0.1611.30.94Os03g0329900AK063486.1-Phosphate starvation regulator protein (Regulatoryprotein of P- starvation acclimation response Psr1)2e-11At4g28610PHR1 (PHOSPHATE STARVATION RESPONSE 1)O.I.H.G.S.X.
0.1510.30.95Os08g0224200AK101331.1-YTH domain protein 2 (High-glucose-regulatedprotein 8) (NY-REN-2 antigen) (CLL-associated antigenKW-14). Splice isoform 21e-21At3g13060-O.I.H.G.S.X.
0.1510.30.96Os03g0641700AK120708.1-Conserved hypothetical protein3e+0At5g19480unknown proteinO.I.H.G.S.X.
0.1510.30.94Os05g0511300AK070791.1-Conserved hypothetical protein9e-26At2g32170-O.I.H.G.S.X.
0.127.20.94Os03g0372700AK073312.1-Low temperature viability protein family protein3e-4At3g50550unknown proteinO.I.H.G.S.X.
0.105.70.94Os06g0308100AK071054.1-Dual specificity protein phosphatase familyprotein1e-8At2g04550IBR5 (INDOLE-3-BUTYRIC ACID RESPONSE 5)O.I.H.G.S.X.
0.084.20.95Os01g0575500CB646902-Stomatal cytokinesis defective6e-19At1g49040SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
48.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.398.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.398.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0291GO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.Link to AmiGO
0.0271GO:0006470The process of removing one or more phosphoric residues from a protein.Link to AmiGO
0.0191GO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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