Co-expression analysis

Gene ID Os07g0488500
Gene name
Homology with ArabidopsisSimilar to At5g17400: ER-ANT1 (ENDOPLASMIC RETICULUM-DENINE NUCLEOTIDE TRANSPORTER 1) (HF=2e+0)
Module size 11 genes
NF 0.64
%ile 86.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6281.50.98Os07g04885009635.m02972--2e+0At5g17400ER-ANT1 (ENDOPLASMIC RETICULUM-DENINE NUCLEOTIDE TRANSPORTER 1)O.I.H.G.S.X.
0.7491.40.99Os02g02088009630.m01061--3e+1At5g27238-O.I.H.G.S.X.
0.6483.40.99Os11g04445009639.m02279--1e+1At5g57450XRCC3O.I.H.G.S.X.
0.6281.50.99Os03g03814009631.m02601--6e-1At4g24026unknown proteinO.I.H.G.S.X.
0.6181.20.99Os10g0376700NM_196159.1--9e-2At3g59400GUN4O.I.H.G.S.X.
0.6181.20.99Os02g04661009630.m02522--1e+1At5g64080protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.6181.20.99Os10g0513400NM_197328.1-Cytochrome P450 family protein5e-2At1g64940CYP89A6O.I.H.G.S.X.
0.6181.20.99Os05g05919509633.m04854--8e-1At2g05380GRP3S (GLYCINE-RICH PROTEIN 3 SHORT ISOFORM)O.I.H.G.S.X.
0.6181.20.99Os10g01303009638.m00311--5e-1At5g55570unknown proteinO.I.H.G.S.X.
0.5676.30.99Os06g05840009634.m03673-Pectate lyase/Amb allergen family protein1e-4At4g24780pectate lyase family proteinO.I.H.G.S.X.
0.5269.60.99Os01g08200009629.m05941-Trans-cinnamate 4-monooxygenase (EC 1.14.13.11)(Cinnamic acid 4- hydroxylase) (CA4H) (C4H) (P450C4H)(Cytochrome P450 73)1e-17At2g30490C4H (CINNAMATE-4-HYDROXYLASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
47.699.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
30.999.7GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
13.298.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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