Co-expression analysis

Gene ID Os07g0456000
Gene name
Homology with ArabidopsisSimilar to At4g27150: 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 (HF=1e+0)
Module size 6 genes
NF 0.64
%ile 86.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.98Os07g04560009635.m02632--1e+0At4g271502S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2O.I.H.G.S.X.
0.8094.60.99Os06g0528000NM_196265.1--1e+0At5g52570BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)O.I.H.G.S.X.
0.6787.20.99Os09g02593669637.m00619--6e+0At5g60400unknown proteinO.I.H.G.S.X.
0.5068.00.99Os03g06224009631.m04085-Conserved hypothetical protein4e+0At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.4660.90.98Os01g0593100NM_192598.1-Hypothetical protein2e+0At1g43330myb family protein-relatedO.I.H.G.S.X.
0.4051.10.98Os06g0275750NM_185804.1--1e-1At2g27580zinc finger (AN1-like) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
60.999.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
37.499.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.698.9GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
8.297.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.197.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM159217Seed (S4, 11 - 20 dap), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
7.797.6GSM195229EndospermGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
6.797.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1618786_at, orthologous to the query gene, Os07g0456000

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.3853.61618786_atAt4g27150--1e+0At5g11440CID5O.I.H.G.S.X.
0.2225.61616228_atAt4g27150--2e+0At1g19086unknown proteinO.I.H.G.S.X.
0.2225.61615204_atAt4g27150--1e+0At3g21580cobalt ion transmembrane transporterO.I.H.G.S.X.
0.1616.71616895_atAt4g27150--7e-3At1g69180CRC (CRABS CLAW)O.I.H.G.S.X.
0.1414.41616290_atAt4g27150--7e-5At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)O.I.H.G.S.X.
0.1212.11617917_atAt4g27150--4e+0At1g53100acetylglucosaminyltransferaseO.I.H.G.S.X.
0.1212.11615053_atAt4g27150--1e+0At4g39986unknown proteinO.I.H.G.S.X.
0.088.51612237_atAt4g27150--8e-11At4g24240WRKY7O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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