Co-expression analysis

Gene ID Os07g0442900
Gene name
Homology with ArabidopsisSimilar to At3g06390: integral membrane family protein (HF=5e-1)
Module size 10 genes
NF 0.30
%ile 32.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.82Os07g0442900AK073296.1-Plant integral membrane protein family protein5e-1At3g06390integral membrane family proteinO.I.H.G.S.X.
0.5068.00.83Os01g0975300AY398581.1-Myb-related protein Atmyb5 (Myb-related protein 5)(MYB transcription factor)5e-3At5g37550unknown proteinO.I.H.G.S.X.
0.4051.10.85Os09g04091009637.m02088-Conserved hypothetical protein2e+0At5g51590DNA-binding protein-relatedO.I.H.G.S.X.
0.4051.10.85Os02g0218800AK105964.1-Allene oxide synthase (EC 4.2.1.92)2e-1At2g35700ERF38 (ERF FAMILY PROTEIN 38)O.I.H.G.S.X.
0.3948.30.85Os09g0361300AK110933.1-Conserved hypothetical protein2e+0At4g35837unknown proteinO.I.H.G.S.X.
0.3541.70.86Os07g0539300AK066237.1-Glycoside hydrolase, family 17 protein2e-2At1g77790glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.2422.40.88Os03g0288000AK103162.1-Metallothionein-like protein 1 (MT-1)4e-1At5g02380MT2B (METALLOTHIONEIN 2B)O.I.H.G.S.X.
0.2016.50.86Os04g0452700AK108820.1-Monosaccharide transporter 14e-6At1g34580monosaccharide transporter, putativeO.I.H.G.S.X.
0.1510.30.89Os01g0284500AF032974.1-Nectarin 1 precursor (EC 1.15.1.1) (Superoxidedismutase [Mn])7e-3At1g02335GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.)O.I.H.G.S.X.
0.149.30.86Os06g0692100AK110293.1-Protein kinase domain containing protein1e-1At1g48480RKL1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.199.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.098.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0531GO:0006260The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA.Link to AmiGO
0.0391GO:0008643The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.Link to AmiGO
0.0271GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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