Co-expression analysis

Gene ID Os07g0410600
Gene name
Homology with ArabidopsisSimilar to At2g46400: WRKY46 (HF=1e+0)
Module size 12 genes
NF 0.69
%ile 91.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.99Os07g0410600NM_187805.1--1e+0At2g46400WRKY46O.I.H.G.S.X.
0.8094.60.99Os07g0620000NM_189851.1--2e+0At4g06599ubiquitin family proteinO.I.H.G.S.X.
0.7391.10.99Os06g06105509634.m03920--1e+1At5g48290heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.7088.40.99Os07g04876009635.m02973--3e-2At3g28350-O.I.H.G.S.X.
0.6987.90.99Os11g0672600AK119365.1-RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein6e-3At1g70830MLP28 (MLP-LIKE PROTEIN 28)O.I.H.G.S.X.
0.6787.20.99Os01g0786700NM_190834.1-Conserved hypothetical protein1e+1At5g47870unknown proteinO.I.H.G.S.X.
0.6483.40.99Os06g05391009634.m03289-Hypothetical protein7e-1At1g49170unknown proteinO.I.H.G.S.X.
0.6483.40.99Os07g0585400NM_187008.1--8e+0At5g42655-O.I.H.G.S.X.
0.6382.70.99Os04g03256009632.m02432--8e-2At5g49920octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.6181.20.99Os08g0210300AK064592.1-Hypothetical protein9e-1At4g03175protein kinase family proteinO.I.H.G.S.X.
0.5978.00.99Os12g04093009640.m02083--1e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.H.G.S.X.
0.5877.00.99Os02g07992009630.m05523--1e-1At5g22545unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.599.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.498.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.998.6GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.498.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage