Co-expression analysis

Gene ID Os07g0409900
Gene name
Homology with ArabidopsisSimilar to At2g17890: CPK16 (HF=6e-33)
Module size 6 genes
NF 0.42
%ile 52.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.94Os07g0409900AF194414.2-Protein kinase domain containing protein6e-33At2g17890CPK16O.I.H.G.S.X.
0.6787.20.94Os12g0641100AK100537.1-Sodium/hydrogen exchanger family protein8e-2At1g14660ATNHX8O.I.H.G.S.X.
0.5777.00.94Os07g0511000AK070461.1-Conserved hypothetical protein2e-2At5g55060unknown proteinO.I.H.G.S.X.
0.4051.10.95Os03g0283800AK072879.1-RabGAP/TBC domain containing protein2e-15At3g55020RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.3644.00.95Os01g0733600AK066744.1-Flavodoxin/nitric oxide synthase domain containingprotein6e-12At3g02280flavodoxin family proteinO.I.H.G.S.X.
0.116.50.95Os03g0363900AK066313.1-Zn-finger, DHHC type domain containing protein2e-4At3g04970zinc finger (DHHC type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
68.899.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
11.298.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.097.6GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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