Co-expression analysis

Gene ID Os07g0277200
Gene name
Homology with ArabidopsisSimilar to At1g62040: ATG8C (autophagy 8c) (HF=1e+0)
Module size 6 genes
NF 0.06
%ile 4.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3236.30.77Os07g0277200AK058657.1--1e+0At1g62040ATG8C (autophagy 8c)O.I.H.G.S.X.
0.4458.10.80Os10g0178500AK066178.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein3e+0At4g16750DRE-binding transcription factor, putativeO.I.H.G.S.X.
0.3338.80.78Os01g0227800CB621372-Cytochrome P450 family protein4e+0At5g42635glycine-rich proteinO.I.H.G.S.X.
0.031.40.76Os02g0644600AK067055.1-Protein prenyltransferase domain containingprotein2e+0At1g43630unknown proteinO.I.H.G.S.X.
0.031.40.77Os01g0849000AK105208.1--2e-2At1g28190unknown proteinO.I.H.G.S.X.
0.021.00.79Os06g0367100AK066930.1-Glycoside hydrolase, family 13, N-terminal domaincontaining protein2e-6At3g20440alpha-amylase/ catalytic/ cation bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
88.4100.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
53.699.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.998.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in riceLink to GEO
9.097.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0631GO:0006725The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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