Co-expression analysis

Gene ID Os07g0248401
Gene name
Homology with ArabidopsisSimilar to At1g70400: - (HF=3e+0)
Module size 6 genes
NF 0.62
%ile 84.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.99Os07g02484019635.m01434--3e+0At1g70400-O.I.H.G.S.X.
0.7391.10.99Os02g01962009630.m00943--5e-1At4g25490CBF1 (C-REPEAT/DRE BINDING FACTOR 1)O.I.H.G.S.X.
0.6787.20.99Os02g04514009630.m02380--5e-2At3g46380unknown proteinO.I.H.G.S.X.
0.5777.00.99Os03g03585009631.m02379--3e-1At2g14935LCR40 (Low-molecular-weight cysteine-rich 40)O.I.H.G.S.X.
0.5068.00.99Os07g04041009635.m02067--5e-2At5g47175LCR3 (Low-molecular-weight cysteine-rich 3)O.I.H.G.S.X.
0.4051.10.99Os04g02806009632.m01942--8e-7At5g14180MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
39.199.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
36.999.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.399.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.099.1GSM421719MOCK, 24 hai - rep1GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicolaLink to GEO
18.899.0GSM195222Ovary 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
18.899.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.298.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM195221Ovary 1, biological rep 1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
13.898.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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