Co-expression analysis

Gene ID Os07g0216100
Gene name
Homology with ArabidopsisSimilar to At5g66490: unknown protein (HF=9e-2)
Module size 6 genes
NF 0.31
%ile 33.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.96Os07g0216100AK107820.1-Hypothetical protein9e-2At5g66490unknown proteinO.I.H.G.S.X.
0.4660.90.95Os09g0110500AK069507.1-Hypothetical protein2e+0At2g19300unknown proteinO.I.H.G.S.X.
0.4660.90.96Os09g04623009637.m02532-Esterase/lipase/thioesterase domain containingprotein3e+0At5g1620050S ribosomal protein-relatedO.I.H.G.S.X.
0.3745.00.96Os01g0176700AK109808.1-Myb, DNA-binding domain containing protein1e-12At2g03500myb family transcription factorO.I.H.G.S.X.
0.2117.90.96Os09g04335009637.m02294-Glycosyl transferase, family 31 protein5e-1At3g29300unknown proteinO.I.H.G.S.X.
0.116.50.96Os01g0710200NM_191697.1-Amine oxidase family protein3e+0At4g33660unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6079.70.95Os06g02729009634.m01625-Protein of unknown function DUF231 domaincontaining protein3e+0At5g19473-O.I.H.G.S.X.
0.5573.70.94Os01g0254300NM_187890.1-Pectinesterase (EC 3.1.1.11) (Fragment)1e-3At3g06830pectinesterase family proteinO.I.H.G.S.X.
0.5068.00.93Os05g0410800AK108312.1-Conserved hypothetical protein1e+0At4g32340-O.I.H.G.S.X.
0.5068.00.94Os12g0157000AK110593.1-Hypothetical protein1e-5At2g36080DNA-binding protein, putativeO.I.H.G.S.X.
0.4458.10.93Os05g01762009640.m03393--3e+0At1g61930unknown proteinO.I.H.G.S.X.
0.4458.10.92Os08g0136100AB101650.1-Anthocyaninless23e-12At4g21750ATML1 (MERISTEM LAYER 1)O.I.H.G.S.X.
0.3338.80.95Os12g06044009640.m04027--3e+0At1g07135glycine-rich proteinO.I.H.G.S.X.
0.3134.50.95Os11g0294800AK109559.1-Resistance protein candidate (Fragment)5e-2At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.H.G.S.X.
0.2321.20.92Os01g0119500AK105256.1-Conserved hypothetical protein2e-1At2g34330unknown proteinO.I.H.G.S.X.
0.2117.90.93Os06g0687600CF196060-Uncharacterized plant-specific domain 01627containing protein8e+0At5g06265hyaluronan mediated motility receptor-relatedO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.698.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
10.098.0GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
9.497.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM159173Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
8.697.8GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
7.997.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.997.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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