Co-expression analysis

Gene ID Os07g0212300
Gene name
Homology with ArabidopsisSimilar to At5g01280: - (HF=4e+0)
Module size 17 genes
NF 0.65
%ile 87.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8996.90.90Os07g0212300BI801817-NUDIX hydrolase domain containing protein4e+0At5g01280-O.I.H.G.S.X.
0.8696.40.92Os04g0404400AK112111.1-Bipartite response regulator, C-terminal effectordomain containing protein3e+0At5g45320-O.I.H.G.S.X.
0.8094.60.93Os06g0221300AK108233.1-Dehydration stress-induced protein3e-2At3g10040transcription factorO.I.H.G.S.X.
0.8094.60.94Os07g0222000AK107870.1--2e+1At5g47290myb family transcription factorO.I.H.G.S.X.
0.7993.60.91Os06g0507100AA753757-Gliadin/LMW glutenin family protein3e+0At1g66480PMI2 (plastid movement impaired 2)O.I.H.G.S.X.
0.7893.40.94Os06g0133000AB066094.1-Granule-bound starch synthase I, chloroplastprecursor (EC 2.4.1.21)3e-7At1g32900starch synthase, putativeO.I.H.G.S.X.
0.7793.10.90Os07g0214100D11431.1-Seed allergenic protein RA17 precursor5e+0At3g23760-O.I.H.G.S.X.
0.7189.60.95Os02g0202400AK107368.1-Brittle-1 protein, chloroplast precursor8e-1At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6281.50.93Os01g0898500AK106563.1-Patatin-like protein 2 (Fragment)8e-1At2g26560PLA2A (PHOSPHOLIPASE A 2A)O.I.H.G.S.X.
0.5877.00.96Os04g0164900BI799485-Starch debranching enzyme7e-6At5g04360ATLDA (LIMIT DEXTRINASE)O.I.H.G.S.X.
0.5777.00.94Os07g0214600NM_186509.1-Seed allergenic protein RA17 precursor4e+0At5g57450XRCC3O.I.H.G.S.X.
0.5573.70.94Os07g0213800AK107215.1-Alpha-amylase inhibitor BMAI-1 precursor (AllergenHor v 1) (Alpha- amylase flour inhibitor) (Fragment)6e+0At4g22650-O.I.H.G.S.X.
0.5471.90.92Os07g0216600AK107674.1-Cereal seed allergen, trypsin/alpha-amylaseinhibitor family protein5e+0At5g10980histone H3O.I.H.G.S.X.
0.5168.70.92Os07g0214300X62091.1-Seed allergenic protein RAG2 precursor5e+0At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)O.I.H.G.S.X.
0.5068.00.92Os01g0393100AK107407.1-No apical meristem (NAM) protein domain containingprotein4e-24At5g18270ANAC087O.I.H.G.S.X.
0.5068.00.94Os02g0249000AY429650.1--2e-1At2g23560MES7 (METHYL ESTERASE 7)O.I.H.G.S.X.
0.4863.70.90Os07g0216700BI797025-Cereal seed allergen, trypsin/alpha-amylaseinhibitor family protein1e-1At1g22250unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.499.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.099.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.698.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1051GO:0005982The chemical reactions and pathways involving starch, the most important reserve polysaccharide in plants. It is a glucan consisting of two components, amylose and amylopectin, which are both glucose homopolymers. Starch is synthesized as a temporary storage form of carbon and can be catabolized to produce sucrose.Link to AmiGO
0.1051GO:0006839Transport of substances into, out of or within a mitochondrion.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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