Co-expression analysis

Gene ID Os07g0208100
Gene name
Homology with ArabidopsisSimilar to At1g10640: polygalacturonase (HF=7e-1)
Module size 6 genes
NF 0.17
%ile 14.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.97Os07g0208100AK119482.1-Polygalacturonase A (Fragment)7e-1At1g10640polygalacturonaseO.I.H.G.S.X.
0.5573.70.97Os01g0513900AK103077.1-Kinesin heavy chain (Fragment)2e-12At1g18370HIK (HINKEL)O.I.H.G.S.X.
0.4458.10.97Os01g0512400AK058757.1-Hypothetical protein1e+0At3g25030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3134.50.98Os03g0137700AK069498.1-Mg2+ transporter protein, CorA-like family protein4e+0At5g43540zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.105.70.97Os07g0593200AK063361.1-Conserved hypothetical protein2e-2At4g29240leucine-rich repeat family protein / extensin family proteinO.I.H.G.S.X.
0.042.00.97Os02g0536400AK120158.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e+0At3g47295unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.699.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.397.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM431929Root- +Fe-P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
5.997.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM431930Root- +Fe-P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
5.696.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.996.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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